Dynamic organization and function of synapses


Our team is a federation of complementary principal investigators united by a common ambition: to decipher the fundamental principles governing synaptic organization, signaling, and plasticity. We combine interdisciplinary expertise in neuroscience, physics, chemistry, and cell biology to unravel how molecular assemblies within the synapse control information processing in the brain, in both health and disease.
Our research encompasses a wide spectrum of approaches and topics, reflecting the diversity and synergy of our group:

  • Daniel Choquet leads efforts to elucidate the nanoscale dynamics and trafficking of AMPA-type glutamate receptors (AMPARs), investigating how their mobility, interactions with auxiliary proteins, and organization at the synapse regulate synaptic plasticity, learning, and memory. His work leverages advanced imaging, molecular engineering, and electrophysiological approaches to link receptor organization to higher brain functions and disorders.
  • Matthieu Sainlos develops innovative chemical biology tools and engineered proteins to probe and manipulate synaptic molecules. His group pioneers the design of highly specific probes, biosensors, and protein-based actuators to dissect protein-protein interactions and signaling pathways at the synapse, opening new avenues to study and control synaptic function at the molecular level.
  • Eric Hosy explores the nanoscale physiology of excitatory synapses using cutting-edge super-resolution imaging and single-molecule tracking techniques. His research focuses on the dynamic organization of key synaptic components—including AMPARs, NMDARs, and associated scaffolding proteins—and how their spatial and temporal regulation shapes synaptic efficacy, plasticity, and network adaptation.
  • Anna Brachet investigates the molecular and biophysical mechanisms that govern cytoskeletal architecture and membrane organization in neurons and astrocytes. She examines how cytoskeletal elements, such as spectrins and actin, and their interaction partners control the structure, stability, and mechano-transduction properties of dendritic spines, with important implications for synaptic signaling and brain development.

Our collective work ranges from the fundamental understanding of synaptic nano-architecture and receptor dynamics, to the development of new molecular tools, and the study of synaptic dysfunctions in neurodevelopmental and neuropsychiatric disorders. Together, we aim to provide an integrated view of how synapses operate and adapt, fostering innovation through our collaborative and interdisciplinary environment.

Techniques

  1. Super-resolution microscopy (e.g., SMLM, STED, U-PAINT, DNA-PAINT)
  2. Light sheet fluorescence microscopy (LSFM, LLSM)
  3. In vivo and ex vivo gene transfer
  4. Electrophysiology (patch-clamp recordings in brain slices)
  5. Protein engineering and chemical biology
  6. Single-molecule tracking in neurons
  7. Optogenetics and photoswitchable tools
  8. Biochemistry and molecular biology
  9. Advanced image analysis and computational modeling

Keywords

  • Synaptic biology
  • Glutamate receptors
  • Synaptic plasticity
  • AMPA receptor trafficking
  • Spectrin biology
  • PDZ domain proteins
  • Nanoscale imaging
  • Super-resolution microscopy
  • Protein engineering
  • Neurodevelopmental disorders
  • Single-molecule tracking
  • Optogenetics
  • Electrophysiology

Selected publications

Activity-dependent diffusion trapping of AMPA receptors as a key step for expression of early LTP
Agata Nowacka, Angela M. Getz, Diogo Bessa-Neto, Daniel Choquet
Phil. Trans. R. Soc. B. 2024-06-10

10.1098/rstb.2023.0220

Celebrating the Birthday of AMPA Receptor Nanodomains: Illuminating the Nanoscale Organization of Excitatory Synapses with 10 Nanocandles
Yuko Fukata, Masaki Fukata, Harold D. MacGillavry, Deepak Nair, Eric Hosy
J. Neurosci.. 2024-06-05

10.1523/JNEUROSCI.2104-23.2024

Engineering paralog-specific PSD-95 recombinant binders as minimally interfering multimodal probes for advanced imaging techniques
Charlotte Rimbault, Christelle Breillat, Benjamin Compans, Estelle Toulmé, Filipe Nunes Vicente, Monica Fernandez-Monreal, Patrice Mascalchi, Camille Genuer, Virginia Puente-Muñoz, Isabel Gauthereau, Eric Hosy, Stéphane Claverol, Gregory Giannone, Ingrid Chamma, Cameron D Mackereth, Christel Poujol, Daniel Choquet, Matthieu Sainlos
eLife. 2024-01-03

10.7554/eLife.69620

Targeting of membrane proteins with fluoronanogold probes for high-resolution correlative microscopy
Daniel Choquet, Melina Petrel, Mónica Fernández-Monreal
Correlative Light and Electron Microscopy V. 2024-01-01

https://www.bordeaux-neurocampus.fr/10926

CA3 hippocampal synaptic plasticity supports ripple physiology during memory consolidation
Hajer El Oussini, Chun-Lei Zhang, Urielle François, Cecilia Castelli, Aurélie Lampin-Saint-Amaux, Marilyn Lepleux, Pablo Molle, Legeolas Velez, Cyril Dejean, Frederic Lanore, Cyril Herry, Daniel Choquet, Yann Humeau
Nat Commun. 2023-12-14

10.1038/s41467-023-42969-x

Phosphorylation of PSD-95 at serine 73 in dCA1 is required for extinction of contextual fear.
Magdalena Ziółkowska, Malgorzata Borczyk, Anna Cały, Kamil F. Tomaszewski, Agata Nowacka, Maria Nalberczak-Skóra, Małgorzata Alicja Śliwińska, Kacper Łukasiewicz, Edyta Skonieczna, Tomasz Wójtowicz, Jakub Wlodarczyk, Tytus Bernaś, Ahmad Salamian, Kasia Radwanska
PLoS Biol. 2023-05-08

10.1371/journal.pbio.3002106

Impact of membrane lipid polyunsaturation on dopamine D2 receptor ligand binding and signaling.
Marie-Lise Jobin, Véronique De Smedt-Peyrusse, Fabien Ducrocq, Rim Baccouch, Asma Oummadi, Maria Hauge Pedersen, Brian Medel-Lacruz, Maria-Florencia Angelo, Sandrine Villette, Pierre Van Delft, Laetitia Fouillen, Sébastien Mongrand, Jana Selent, Tarson Tolentino-Cortez, Gabriel Barreda-Gómez, Stéphane Grégoire, Elodie Masson, Thierry Durroux, Jonathan A. Javitch, Ramon Guixà-González, Isabel D. Alves, Pierre Trifilieff
Mol Psychiatry. 2023-01-06

10.1038/s41380-022-01928-6